Biosemiotics and the Origins of Life on Earth (Part 3 of 8)

0286 An example that is closer to Tabaczek’s argument sounds much less lame.

Mitochondria produce ATP from sugar and oxygen.  I breathe in order to supply oxygen to my mitochondria.  I eat toast in order to supply the sugar.

0287 Outside the body, the reaction of sugar with oxygen is called “combustion”2a.

Inside the body, the degradation of sugar into carbon dioxide and water belongs to the Kreb’s cycle1b.  The combination of atomic hydrogen (released by the degradation of sugar) with molecular oxygen is called the mitochondrial electron transport chain1b.  These separated reactions both produce ATP2b, a high-energy molecule that, given enough time, will degrade back to ADP and Pi (inorganic phosphate).

0288 ATP2b is one of the currencies of the cell.  All sorts of biosynthetic routes and transportation mechanisms3c within a eukaryotic cell will take the ATP, which has three covalently bound phosphates, then pop off the last phosphate1b, and use the released energy to do biochemical or kinetic work2c.

0289 Here is a picture of the Deacon-Tabaczek interscope for mitochondria.

0290 On the adjusted thermodynamic or content level, the normal context of orthograde reactions3a brings the actuality of the transfer of electrons from sugar to oxygen2a (yielding water and carbon dioxide)2a into relation with the potential of ‘the chemistry of glucose and oxygen’1a.  

On the homeodynamic level, the normal context of cellular matrix and mitochondria2b bring the actuality of ATP (as an emergent being)2b into relation with the potential of ‘the Kreb’s cycle and the mitochondrial electron-transport chain’1b.

On the morphodynamic level, the normal context of staying alive3c brings the actuality of biosynthesis and cellular transport2c into relation with the potential of ‘utilizing the controlled degradation of ATP in order to do work’1c.

0291 Now, I turn to biosemiotics.

Recall that Sharov and Tonnessen’s noumenal overlay presents the triadic specifying sign-relation (connecting situation and content levels of an interscope)…

…as a dyadic relational structure.

0292 A specifying sign-relation also stands within the interscope for emergence.

The specifying sign-relation stands out when ATP2b, as an emergent being, associates to the specifying sign-object (SOs).  then, other elements of the interscope for mitochondrial respiration fall into slots in the S&T noumenal overlay.